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Protein / gene summary

Protein 554925 (596 aa) Sequence
Accession YP_003009441.1
Organism Paenibacillus sp. JDR-2
Replicon complete genome
Description histidine kinase
Protein Refseq annotation
Note PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase
Gene 576380 (1,791 bp) Sequence
Locus Pjdr2_0675
Location 779383..781173
Strand +
GC content 50.8%
Refseq cross-references (more)
NCBI Gene ID 8129722
GI 251794710
InterPro IPR010559
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Amino acid sequence

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MNIGRGFFRFNGFSSMTMQKKLIIVFVVLIIIPISATGFISYQNYIQSINKNTKNYVTEL

ISNMQANLDSHLEDMMTVSKIPLYSVEMQQYMSHQEMTLEKQRQMDFYIGLLDSMRKNLY

SAYLYDNYGNVFYRIKTDAIREDMMSHYEEWKRLAIEGNGNPVIIPTQRVMRANGTPQYL

FTVLRSIRDIGTLETIGYVAVDADIHVIEDVVQELNTVTNGKTLIIDGQNNVAYDSDHVL

TATNITGNEVIQRAVGDQGSFNVVVDGSSYICSYSVSKDTGWKIFAFVPVDYLHHDAQLT

RNVTLTTTIGIIGFALLVSVILAFMMTRSLRQMTDLMRTVRGGNLDVSFDVKQKDEVGIL

GTEFNRMLRRMKELISEIYVIQSRKKEADLEALQSQINPHFIYNTLETIRMTAEINDDEE

VAEMTFTLGKLLRYSINRGRETVELREELQHLERYLQLLRYRFSNRFVVAFDIPQELMNF

PVMKLTFQPIVENAILHGMEGKPNEVTIRLSAELKEQLLIFSIKDEGAGMDGMTLDLLRQ

AMNGTRESASSKTGVGLRNVNERIKLHYGETYGLEIESKWGEGTTVNLKLPRKHGE

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596

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Nucleotide sequence

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1021

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ATGAATATAGGACGTGGTTTTTTCCGTTTTAACGGGTTTAGCAGCATGACCATGCAGAAG

AAGCTGATTATCGTATTCGTGGTTCTAATCATTATTCCTATTTCGGCTACGGGCTTTATT

TCCTATCAGAATTACATTCAATCTATTAATAAGAATACAAAAAACTACGTTACCGAGCTG

ATCAGCAACATGCAGGCAAATCTGGACAGCCATCTGGAAGACATGATGACCGTCAGCAAA

ATCCCGCTCTACTCGGTCGAAATGCAGCAATACATGAGCCATCAGGAGATGACGCTCGAG

AAGCAGCGCCAGATGGACTTCTATATCGGCCTGCTCGACAGCATGAGGAAAAACCTCTAT

TCCGCCTATCTCTACGATAATTACGGCAATGTATTCTACCGGATCAAGACGGATGCCATC

CGCGAGGATATGATGAGCCATTACGAGGAATGGAAGCGGCTCGCTATCGAGGGCAACGGC

AATCCCGTCATTATTCCGACCCAGCGGGTGATGCGCGCTAACGGCACTCCGCAATATCTG

TTCACGGTGCTCCGGAGCATCCGGGATATCGGCACGCTGGAGACAATCGGCTACGTAGCG

GTGGATGCCGATATTCACGTCATTGAGGATGTCGTGCAGGAGCTGAATACGGTAACGAAC

GGGAAGACGCTTATTATTGACGGCCAGAACAATGTGGCTTATGACAGCGACCATGTGCTG

ACGGCCACCAATATTACGGGCAACGAGGTCATTCAGAGAGCCGTAGGCGATCAGGGCAGC

TTTAATGTCGTGGTCGACGGAAGCTCTTACATATGCAGTTACTCCGTATCCAAGGATACC

GGCTGGAAAATATTCGCGTTTGTTCCGGTTGACTATCTGCATCACGATGCCCAATTGACG

CGGAACGTCACGCTTACGACAACCATCGGGATTATCGGCTTTGCGCTGCTAGTCTCGGTT

ATATTGGCTTTTATGATGACCAGATCGCTCCGTCAGATGACGGACCTGATGCGCACGGTG

CGCGGCGGCAACCTGGACGTCAGCTTTGACGTGAAGCAGAAGGACGAGGTGGGTATACTC

GGCACGGAATTTAACCGCATGCTAAGGCGGATGAAGGAACTGATCTCCGAAATTTACGTG

ATCCAGTCCCGCAAAAAAGAGGCTGATCTGGAAGCGCTGCAAAGCCAGATTAACCCCCAT

TTCATATACAACACCTTGGAGACCATCCGGATGACCGCCGAGATTAACGATGACGAAGAG

GTCGCGGAGATGACTTTTACGCTTGGCAAGCTATTAAGATACAGCATTAACCGGGGGCGG

GAGACGGTTGAGTTAAGGGAAGAGCTGCAGCATTTGGAGCGGTATCTTCAATTATTGCGC

TACCGGTTCAGCAACCGGTTTGTCGTTGCCTTCGACATTCCGCAGGAGCTGATGAACTTC

CCGGTCATGAAGCTGACCTTCCAGCCGATTGTCGAGAATGCGATTCTCCATGGCATGGAG

GGTAAGCCCAACGAAGTCACGATCCGCTTGTCGGCGGAGCTGAAGGAGCAGCTTCTTATT

TTTTCGATCAAAGACGAAGGAGCGGGGATGGACGGCATGACGCTGGATCTGCTTCGGCAA

GCGATGAACGGTACGCGCGAATCGGCAAGCTCCAAGACAGGGGTAGGCCTGCGCAATGTC

AACGAACGGATTAAGCTGCATTACGGCGAGACGTATGGGCTGGAGATCGAGAGCAAGTGG

GGAGAAGGAACAACCGTTAATCTAAAACTTCCGAGAAAGCATGGTGAATAA

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1791

Domain architecture

Amino acid scale

List domains

Source Domain / Region Position Length Score E-value Overlap
Pfam HAMP 307 .. 372 66 49.6 2.5e-13 -
Pfam His_kinase 390 .. 469 80 90.4 4e-26 Yes
Agfam HK_CA 438 .. 592 155 167.2 1.219e-49 -
Pfam HATPase_c 487 .. 592 106 51.1 7.4e-14 Yes

Click to view sequence

Genome neighborhood

Neighboring DNA

Source complete genome
Relative to Pjdr2_0675 (779383 .. 781173)
Direction
bp

Additional cross-references

Source Identifiers
GI 169006690, 169186721
UniProt B1DAF1
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