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Protein / gene summary

Protein 3608714 (297 aa) Sequence
Accession ZP_05390888.1
Organism Clostridium carboxidivorans P7 (draft v1)
Contig ctg00183 WGS
Description transcriptional regulator, LysR family
Protein Refseq annotation
Note PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: btk:BT9727_4901 LysR family transcriptional regulator
Gene 3747438 (894 bp) Sequence
Locus CcarbDRAFT_0888
Location 19779..20672
Strand +
GC content 35.5%
Refseq cross-references
GI 255523925
InterPro IPR005119
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Amino acid sequence

1

61

121

181

241

MELLQLRYFQTVAHLEHMSRAAEQLRIPQPSLSKTISLLEKDLGVLLFDRRGKYIYLNQY

GKAFLRRVDQALAALEDGRHELNDLSGKTFGDVKLAVLAASNLLPDLLSSFCKQYPHINF

NLIQHFSNSITRPDFDLCISSSPVKLNDIDSIPLITEEIFLAVPIEHPLAKRSSIKLTEV

ANDGFISLRRGKKLREITDTFCSYAGFTPHVIFESDDPATVRGLIRAGQGVAFIPAVSWG

GSTGSSMVLLHIEEPVCRRTISLTYKAERYLPKAARLFRQFTIDYFAKLAFNNKAQD

60

120

180

240

297

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Nucleotide sequence

1

61

121

181

241

301

361

421

481

541

601

661

721

781

841

ATGGAATTATTGCAACTTAGATATTTTCAAACAGTAGCCCATCTTGAGCATATGTCAAGG

GCAGCAGAACAACTTCGTATTCCTCAACCATCCCTTAGCAAGACTATTTCTCTTTTAGAA

AAAGATCTGGGTGTTTTATTATTTGATAGACGTGGAAAATACATATATTTAAATCAATAT

GGTAAGGCCTTTTTAAGGAGAGTAGATCAAGCACTAGCAGCATTAGAAGATGGGAGGCAC

GAACTTAATGACTTATCCGGAAAAACCTTTGGAGATGTTAAACTAGCAGTTCTTGCAGCC

TCCAATCTTCTTCCTGATCTTTTAAGTTCATTTTGCAAACAGTATCCACATATAAATTTT

AATCTTATTCAGCATTTTTCAAACTCAATAACACGACCTGACTTCGATTTATGCATATCA

TCTTCACCTGTAAAATTAAATGATATTGACAGTATACCTTTAATAACTGAAGAAATTTTT

TTAGCAGTACCAATAGAACATCCTTTAGCTAAACGAAGCAGTATAAAGCTAACTGAAGTT

GCTAATGATGGTTTTATAAGTTTAAGACGTGGTAAAAAACTTAGAGAAATAACTGACACT

TTTTGCAGCTATGCAGGATTTACTCCCCATGTCATTTTCGAAAGTGATGATCCAGCAACT

GTACGTGGTTTAATAAGAGCTGGTCAAGGTGTAGCATTCATTCCTGCTGTATCCTGGGGA

GGTTCTACAGGTTCTTCTATGGTCCTTTTACATATAGAAGAACCTGTATGTAGGCGTACT

ATATCGCTAACATATAAAGCAGAACGATATCTTCCCAAGGCAGCACGGTTATTTCGTCAA

TTTACCATTGACTATTTTGCTAAACTTGCTTTTAATAATAAAGCTCAGGACTAG

60

120

180

240

300

360

420

480

540

600

660

720

780

840

894

Domain architecture

Amino acid scale

List domains

Source Domain / Region Position Length Score E-value Overlap
Pfam HTH_1 5 .. 61 57 59.1 1.9e-16 -
Pfam LysR_substrate 98 .. 286 189 128.6 1.2e-37 -

Click to view sequence

Genome neighborhood

Neighboring DNA

Source ctg00183 WGS
Relative to CcarbDRAFT_0888 (19779 .. 20672)
Direction
bp
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