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- Acinetobacter radioresistens SK82 (draft v1)
Genome summary
| Organism | Acinetobacter radioresistens SK82 |
|---|---|
| Taxonomy | Bacteria, Proteobacteria, Gammaproteobacteria, Pseudomonadales, Moraxellaceae, Acinetobacter |
| Size | 3.3 Mbp (3,283,705 bp) |
| Status | Incomplete, draft version 1 |
| Contigs | 82 |
| Genes | 3,256 |
| Proteins | 3,188 |
| GC content | 41.5% |
| Gram stain | |
| Shape | |
| Arrangement | |
| Motile | |
| Habitat | |
| Oxygen requirement | |
| Salinity | |
| Temperature range | |
| Pathogenic | |
| Disease |
Genomic distribution of signal transduction proteins by contig
Major modes
| Two-component | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Accession | Contig | Size (Mbp) | One-component | HK | HHK | RR | HRR | Other | Chemotaxis * | ECF | Other | Total |
| Total | 3.28 | 120 | 15 | 2 | 19 | 3 | 8 | 167 | ||||
| NZ_ACVR01000013 | contig00064 WGS | 0.25 | 15 | 1 | 16 | |||||||
| NZ_ACVR01000029 | contig00043 WGS | 0.19 | 4 | 1 | 1 | 1 | 7 | |||||
| NZ_ACVR01000020 | contig00034 WGS | 0.19 | 4 | 1 | 1 | 6 | ||||||
| NZ_ACVR01000061 | contig00058 WGS | 0.17 | 2 | 1 | 1 | 2 | 6 | |||||
| NZ_ACVR01000080 | contig00041 WGS | 0.17 | 5 | 1 | 1 | 7 | ||||||
| NZ_ACVR01000069 | contig00024 WGS | 0.14 | 3 | 3 | ||||||||
| NZ_ACVR01000072 | contig00004 WGS | 0.13 | 2 | 1 | 3 | |||||||
| NZ_ACVR01000032 | contig00067 WGS | 0.12 | 3 | 1 | 4 | |||||||
| NZ_ACVR01000062 | contig00025 WGS | 0.11 | 3 | 1 | 1 | 3 | 8 | |||||
| NZ_ACVR01000025 | contig00096 WGS | 0.10 | 13 | 1 | 14 | |||||||
| Browse major mode distribution for all 82 contigs | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | |
* Note: Chemotaxis is a specialized form of two-component systems (details)
Chemotaxis
| Accession | Contig | Size (Mbp) | MCP | CheW | CheA | CheR | CheB | CheCX | CheV | CheD | CheZ | Other | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | 3.28 | 1 | 1 | 1 | 3 | ||||||||
| NZ_ACVR01000013 | contig00064 WGS | 0.25 | |||||||||||
| NZ_ACVR01000029 | contig00043 WGS | 0.19 | |||||||||||
| NZ_ACVR01000020 | contig00034 WGS | 0.19 | |||||||||||
| NZ_ACVR01000061 | contig00058 WGS | 0.17 | |||||||||||
| NZ_ACVR01000080 | contig00041 WGS | 0.17 | |||||||||||
| NZ_ACVR01000069 | contig00024 WGS | 0.14 | |||||||||||
| NZ_ACVR01000072 | contig00004 WGS | 0.13 | |||||||||||
| NZ_ACVR01000032 | contig00067 WGS | 0.12 | |||||||||||
| NZ_ACVR01000062 | contig00025 WGS | 0.11 | |||||||||||
| NZ_ACVR01000025 | contig00096 WGS | 0.10 | |||||||||||
| Browse chemotaxis distribution for all 82 contigs | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | ||
Neighboring two-component genes
| Amount | Colocated with non 2CG | |
|---|---|---|
| Classical | 12 | 4 |
| Hybrid | ||
| Complex | 2 | 1 |
| Orphan | 7 | 3 |
| Total | 21 | 8 |
