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- Actinosynnema mirum DSM 43827
Genome summary
| Organism | Actinosynnema mirum DSM 43827 |
|---|---|
| Taxonomy | Bacteria, Actinobacteria, Actinobacteridae, Actinomycetales, Pseudonocardineae, Actinosynnemataceae, Actinosynnema |
| Size | 8.2 Mbp (8,248,144 bp) |
| Status | Complete |
| Replicons | 1 |
| Genes | 7,179 |
| Proteins | 6,916 |
| GC content | 73.7% |
| Gram stain | + |
| Shape | |
| Arrangement | |
| Motile | |
| Habitat | Terrestrial |
| Oxygen requirement | |
| Salinity | |
| Temperature range | Mesophilic |
| Pathogenic | |
| Disease |
Genomic distribution of signal transduction proteins by replicon
Major modes
| Two-component | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Accession | Replicon | Size (Mbp) | One-component | HK | HHK | RR | HRR | Other | Chemotaxis * | ECF | Other | Total |
| NC_013093 | complete genome | 8.25 | 582 | 89 | 5 | 81 | 19 | 5 | 16 | 797 | ||
* Note: Chemotaxis is a specialized form of two-component systems (details)
Chemotaxis
| Accession | Replicon | Size (Mbp) | MCP | CheW | CheA | CheR | CheB | CheCX | CheV | CheD | CheZ | Other | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_013093 | complete genome | 8.25 | 13 | 1 | 1 | 3 | 1 | 19 |
Neighboring two-component genes
| Amount | Colocated with non 2CG | |
|---|---|---|
| Classical | 50 | 27 |
| Hybrid | 1 | 1 |
| Complex | 6 | 6 |
| Orphan | 57 | 31 |
| Total | 114 | 65 |
