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- Alteromonas macleodii 'Deep ecotype'
Genome summary
| Organism | Alteromonas macleodii 'Deep ecotype' |
|---|---|
| Taxonomy | Bacteria, Proteobacteria, Gammaproteobacteria, Alteromonadales, Alteromonadaceae, Alteromonas |
| Size | 4.4 Mbp (4,412,282 bp) |
| Status | Complete |
| Replicons | 1 |
| Genes | 4,142 |
| Proteins | 4,072 |
| GC content | 44.9% |
| Gram stain | - |
| Shape | Rod |
| Arrangement | |
| Motile | Yes |
| Habitat | Aquatic |
| Oxygen requirement | Aerobic |
| Salinity | |
| Temperature range | Mesophilic |
| Pathogenic | |
| Disease |
Genomic distribution of signal transduction proteins by replicon
Major modes
| Two-component | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Accession | Replicon | Size (Mbp) | One-component | HK | HHK | RR | HRR | Other | Chemotaxis * | ECF | Other | Total |
| NC_011138 | complete genome | 4.41 | 182 | 29 | 22 | 56 | 1 | 3 | 32 | 8 | 333 | |
* Note: Chemotaxis is a specialized form of two-component systems (details)
Chemotaxis
| Accession | Replicon | Size (Mbp) | MCP | CheW | CheA | CheR | CheB | CheCX | CheV | CheD | CheZ | Other | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_011138 | complete genome | 4.41 | 16 | 3 | 3 | 2 | 3 | 2 | 1 | 1 | 1 | 32 |
Neighboring two-component genes
| Amount | Colocated with non 2CG | |
|---|---|---|
| Classical | 19 | 13 |
| Hybrid | 3 | 1 |
| Complex | 4 | 4 |
| Orphan | 55 | 35 |
| Total | 81 | 53 |
