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- Sorangium cellulosum 'So ce 56'
Genome summary
| Organism | Sorangium cellulosum 'So ce 56' |
|---|---|
| Taxonomy | Bacteria, Proteobacteria, Deltaproteobacteria, Myxococcales, Sorangiineae, Polyangiaceae, Sorangium |
| Size | 13.0 Mbp (13,033,779 bp) |
| Status | Complete |
| Replicons | 1 |
| Genes | 9,703 |
| Proteins | 9,381 |
| GC content | 71.4% |
| Gram stain | - |
| Shape | Rod |
| Arrangement | Singles, Aggregates |
| Motile | Yes |
| Habitat | Terrestrial |
| Oxygen requirement | Aerobic |
| Salinity | |
| Temperature range | Mesophilic |
| Pathogenic | |
| Disease |
Genomic distribution of signal transduction proteins by replicon
Major modes
| Two-component | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Accession | Replicon | Size (Mbp) | One-component | HK | HHK | RR | HRR | Other | Chemotaxis * | ECF | Other | Total |
| NC_010162 | complete genome | 13.03 | 617 | 102 | 32 | 119 | 15 | 2 | 27 | 86 | 52 | 1052 |
* Note: Chemotaxis is a specialized form of two-component systems (details)
Chemotaxis
| Accession | Replicon | Size (Mbp) | MCP | CheW | CheA | CheR | CheB | CheCX | CheV | CheD | CheZ | Other | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_010162 | complete genome | 13.03 | 5 | 6 | 7 | 4 | 4 | 1 | 27 |
Neighboring two-component genes
| Amount | Colocated with non 2CG | |
|---|---|---|
| Classical | 26 | 16 |
| Hybrid | 8 | 5 |
| Complex | 19 | 13 |
| Orphan | 149 | 83 |
| Total | 202 | 117 |
