MiST2: Aeromonas salmonicida subsp. salmonicida A449

Ulrich, L.E. and Zhulin, I.B. Nucleic Acids Res. (2009)

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Aeromonas salmonicida subsp. salmonicida A449

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Genome summary

Organism	Aeromonas salmonicida subsp. salmonicida A449
Taxonomy	Bacteria, Proteobacteria, Gammaproteobacteria, Aeromonadales, Aeromonadaceae, Aeromonas
Size	5.0 Mbp (5,040,536 bp)
Status	Complete
Replicons	6
Genes	4,758
Proteins	4,437
GC content	58.2%
Gram stain	-
Shape	Rod
Arrangement
Motile	Yes
Habitat	Aquatic
Oxygen requirement	Facultative
Salinity
Temperature range	Mesophilic
Pathogenic	Yes: Fish
Disease	Furunculosis

Signal Transduction Profile^*

^* Note: Chart based on domain counts (details)

Genomic distribution of signal transduction proteins by replicon

Major modes

				Two-component
Accession	Replicon	Size (Mbp)	One-component	HK	HHK	RR	HRR	Other	Chemotaxis ^*	ECF	Other	Total
	Total	5.04	239	25	8	38		1	48		13	372
NC_009348	complete genome	4.70	230	25	8	38		1	48		13	363
NC_009349	plasmid pAsa4	0.17	6									6
NC_009350	plasmid pAsa5	0.16	3									3
NC_004924	plasmid pAsa3	0.01
NC_004923	plasmid pAsa1	0.01
NC_004925	plasmid pAsa2	0.01

^* Note: Chemotaxis is a specialized form of two-component systems (details)

Chemotaxis

Accession	Replicon	Size (Mbp)	MCP	CheW	CheA	CheR	CheB	CheCX	CheV	CheZ	Total
	Total	5.04	33	3	2	2	2	1	4	1	48
NC_009348	complete genome	4.70	33	3	2	2	2	1	4	1	48
NC_009349	plasmid pAsa4	0.17
NC_009350	plasmid pAsa5	0.16
NC_004924	plasmid pAsa3	0.01
NC_004923	plasmid pAsa1	0.01
NC_004925	plasmid pAsa2	0.01

Neighboring two-component genes

	Amount	Colocated with non 2CG
Classical	22	17
Hybrid	1	1
Complex	1	1
Orphan	23	13
Total	47	32