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- Frankia sp. EAN1pec
Genome summary
| Organism | Frankia sp. EAN1pec |
|---|---|
| Taxonomy | Bacteria, Actinobacteria, Actinobacteridae, Actinomycetales, Frankineae, Frankiaceae, Frankia |
| Size | 9.0 Mbp (8,982,042 bp) |
| Status | Complete |
| Replicons | 1 |
| Genes | 7,377 |
| Proteins | 7,191 |
| GC content | 71.2% |
| Gram stain | + |
| Shape | |
| Arrangement | Filaments |
| Motile | |
| Habitat | Multiple |
| Oxygen requirement | Aerobic |
| Salinity | |
| Temperature range | Mesophilic |
| Pathogenic | |
| Disease |
Genomic distribution of signal transduction proteins by replicon
Major modes
| Two-component | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Accession | Replicon | Size (Mbp) | One-component | HK | HHK | RR | HRR | Other | Chemotaxis * | ECF | Other | Total |
| NC_009921 | complete genome | 8.98 | 584 | 73 | 6 | 67 | 27 | 4 | 761 | |||
* Note: Chemotaxis is a specialized form of two-component systems (details)
Chemotaxis
| Accession | Replicon | Size (Mbp) | MCP | CheW | CheA | CheR | CheB | CheCX | CheV | CheD | CheZ | Other | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_009921 | complete genome | 8.98 |
Neighboring two-component genes
| Amount | Colocated with non 2CG | |
|---|---|---|
| Classical | 33 | 18 |
| Hybrid | 1 | 1 |
| Complex | 3 | 3 |
| Orphan | 67 | 37 |
| Total | 104 | 59 |
