Cart (0 proteins)- Home
- Paenibacillus sp. JDR-2
Genome summary
| Organism | Paenibacillus sp. JDR-2 |
|---|---|
| Taxonomy | Bacteria, Firmicutes, Bacillales, Paenibacillaceae, Paenibacillus |
| Size | 7.2 Mbp (7,184,930 bp) |
| Status | Complete |
| Replicons | 1 |
| Genes | 6,414 |
| Proteins | 6,213 |
| GC content | 50.3% |
| Gram stain | + |
| Shape | Rod |
| Arrangement | |
| Motile | |
| Habitat | Terrestrial |
| Oxygen requirement | Aerobic |
| Salinity | |
| Temperature range | Mesophilic |
| Pathogenic | |
| Disease |
Genomic distribution of signal transduction proteins by replicon
Major modes
| Two-component | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Accession | Replicon | Size (Mbp) | One-component | HK | HHK | RR | HRR | Other | Chemotaxis * | ECF | Other | Total |
| NC_012914 | complete genome | 7.18 | 466 | 145 | 5 | 136 | 1 | 25 | 22 | 2 | 802 | |
* Note: Chemotaxis is a specialized form of two-component systems (details)
Chemotaxis
| Accession | Replicon | Size (Mbp) | MCP | CheW | CheA | CheR | CheB | CheCX | CheV | CheD | CheZ | Other | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_012914 | complete genome | 7.18 | 16 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 25 |
Neighboring two-component genes
| Amount | Colocated with non 2CG | |
|---|---|---|
| Classical | 112 | 93 |
| Hybrid | 2 | 1 |
| Complex | 8 | 8 |
| Orphan | 34 | 25 |
| Total | 156 | 127 |
