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- Thermotoga naphthophila RKU-10
Genome summary
| Organism | Thermotoga naphthophila RKU-10 |
|---|---|
| Taxonomy | Bacteria, Thermotogae, Thermotogales, Thermotogaceae, Thermotoga |
| Size | 1.8 Mbp (1,809,823 bp) |
| Status | Complete |
| Replicons | 1 |
| Genes | 1,867 |
| Proteins | 1,768 |
| GC content | 46.1% |
| Gram stain | |
| Shape | Rod |
| Arrangement | |
| Motile | Yes |
| Habitat | Specialized |
| Oxygen requirement | Anaerobic |
| Salinity | |
| Temperature range | Hyperthermophilic |
| Pathogenic | |
| Disease |
Genomic distribution of signal transduction proteins by replicon
Major modes
| Two-component | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Accession | Replicon | Size (Mbp) | One-component | HK | HHK | RR | HRR | Other | Chemotaxis * | ECF | Other | Total |
| NC_013642 | complete genome | 1.81 | 64 | 9 | 9 | 14 | 2 | 98 | ||||
* Note: Chemotaxis is a specialized form of two-component systems (details)
Chemotaxis
| Accession | Replicon | Size (Mbp) | MCP | CheW | CheA | CheR | CheB | CheCX | CheV | CheD | CheZ | Other | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_013642 | complete genome | 1.81 | 5 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 14 |
Neighboring two-component genes
| Amount | Colocated with non 2CG | |
|---|---|---|
| Classical | 4 | 3 |
| Hybrid | ||
| Complex | ||
| Orphan | 10 | 9 |
| Total | 14 | 12 |
