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- Streptosporangium roseum DSM 43021
Genome summary
| Organism | Streptosporangium roseum DSM 43021 |
|---|---|
| Taxonomy | Bacteria, Actinobacteria, Actinobacteridae, Actinomycetales, Streptosporangineae, Streptosporangiaceae, Streptosporangium |
| Size | 10.4 Mbp (10,369,518 bp) |
| Status | Complete |
| Replicons | 2 |
| Genes | 9,510 |
| Proteins | 8,975 |
| GC content | 70.9% |
| Gram stain | + |
| Shape | Filament |
| Arrangement | |
| Motile | |
| Habitat | Terrestrial |
| Oxygen requirement | Aerobic |
| Salinity | |
| Temperature range | Mesophilic |
| Pathogenic | |
| Disease |
Genomic distribution of signal transduction proteins by replicon
Major modes
| Two-component | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Accession | Replicon | Size (Mbp) | One-component | HK | HHK | RR | HRR | Other | Chemotaxis * | ECF | Other | Total |
| Total | 10.37 | 887 | 134 | 4 | 111 | 74 | 5 | 1215 | ||||
| NC_013595 | complete genome | 10.34 | 885 | 133 | 4 | 111 | 74 | 5 | 1212 | |||
| NC_013596 | plasmid pSROS01 | 0.03 | 2 | 1 | 3 | |||||||
* Note: Chemotaxis is a specialized form of two-component systems (details)
Chemotaxis
| Accession | Replicon | Size (Mbp) | MCP | CheW | CheA | CheR | CheB | CheCX | CheV | CheD | CheZ | Other | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | 10.37 | ||||||||||||
| NC_013595 | complete genome | 10.34 | |||||||||||
| NC_013596 | plasmid pSROS01 | 0.03 |
Neighboring two-component genes
| Amount | Colocated with non 2CG | |
|---|---|---|
| Classical | 88 | 48 |
| Hybrid | 1 | |
| Complex | 3 | 2 |
| Orphan | 58 | 31 |
| Total | 150 | 81 |
