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- Xylanimonas cellulosilytica DSM 15894
Genome summary
| Organism | Xylanimonas cellulosilytica DSM 15894 |
|---|---|
| Taxonomy | Bacteria, Actinobacteria, Actinobacteridae, Actinomycetales, Micrococcineae, Promicromonosporaceae, Xylanimonas |
| Size | 3.8 Mbp (3,831,380 bp) |
| Status | Complete |
| Replicons | 2 |
| Genes | 3,549 |
| Proteins | 3,443 |
| GC content | 72.5% |
| Gram stain | + |
| Shape | Coccus |
| Arrangement | |
| Motile | No |
| Habitat | Specialized |
| Oxygen requirement | Aerobic |
| Salinity | |
| Temperature range | |
| Pathogenic | |
| Disease |
Genomic distribution of signal transduction proteins by replicon
Major modes
| Two-component | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Accession | Replicon | Size (Mbp) | One-component | HK | HHK | RR | HRR | Other | Chemotaxis * | ECF | Other | Total |
| Total | 3.83 | 179 | 29 | 1 | 29 | 1 | 5 | 244 | ||||
| NC_013530 | complete genome | 3.74 | 178 | 29 | 1 | 29 | 1 | 5 | 243 | |||
| NC_013531 | plasmid pXCEL01 | 0.09 | 1 | 1 | ||||||||
* Note: Chemotaxis is a specialized form of two-component systems (details)
Chemotaxis
| Accession | Replicon | Size (Mbp) | MCP | CheW | CheA | CheR | CheB | CheCX | CheV | CheD | CheZ | Other | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | 3.83 | ||||||||||||
| NC_013530 | complete genome | 3.74 | |||||||||||
| NC_013531 | plasmid pXCEL01 | 0.09 |
Neighboring two-component genes
| Amount | Colocated with non 2CG | |
|---|---|---|
| Classical | 20 | 10 |
| Hybrid | ||
| Complex | 1 | 1 |
| Orphan | 16 | 11 |
| Total | 37 | 22 |
