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- Sebaldella termitidis ATCC 33386
Genome summary
| Organism | Sebaldella termitidis ATCC 33386 |
|---|---|
| Taxonomy | Bacteria, Fusobacteria, Fusobacteriales, Fusobacteriaceae, Sebaldella |
| Size | 4.5 Mbp (4,486,650 bp) |
| Status | Complete |
| Replicons | 3 |
| Genes | 4,266 |
| Proteins | 4,150 |
| GC content | 33.4% |
| Gram stain | - |
| Shape | Rod |
| Arrangement | Singles, Pairs |
| Motile | No |
| Habitat | Host-associated |
| Oxygen requirement | Anaerobic |
| Salinity | |
| Temperature range | Mesophilic |
| Pathogenic | |
| Disease |
Genomic distribution of signal transduction proteins by replicon
Major modes
| Two-component | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Accession | Replicon | Size (Mbp) | One-component | HK | HHK | RR | HRR | Other | Chemotaxis * | ECF | Other | Total |
| Total | 4.49 | 194 | 10 | 12 | 1 | 1 | 218 | |||||
| NC_013517 | complete genome | 4.42 | 192 | 10 | 12 | 1 | 1 | 216 | ||||
| NC_013518 | plasmid pSTERM01 | 0.05 | 2 | 2 | ||||||||
| NC_013519 | plasmid pSTERMP2 | 0.01 | ||||||||||
* Note: Chemotaxis is a specialized form of two-component systems (details)
Chemotaxis
| Accession | Replicon | Size (Mbp) | MCP | CheW | CheA | CheR | CheB | CheCX | CheV | CheD | CheZ | Other | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | 4.49 | 1 | 1 | ||||||||||
| NC_013517 | complete genome | 4.42 | 1 | 1 | |||||||||
| NC_013518 | plasmid pSTERM01 | 0.05 | |||||||||||
| NC_013519 | plasmid pSTERMP2 | 0.01 |
Neighboring two-component genes
| Amount | Colocated with non 2CG | |
|---|---|---|
| Classical | 9 | 8 |
| Hybrid | ||
| Complex | ||
| Orphan | 4 | 4 |
| Total | 13 | 12 |
