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- Fibrobacter succinogenes subsp. succinogenes S85
Genome summary
| Organism | Fibrobacter succinogenes subsp. succinogenes S85 |
|---|---|
| Taxonomy | Bacteria, Fibrobacteres, Fibrobacterales, Fibrobacteraceae, Fibrobacter |
| Size | 3.8 Mbp (3,842,635 bp) |
| Status | Complete |
| Replicons | 1 |
| Genes | 3,188 |
| Proteins | 3,085 |
| GC content | 48.1% |
| Gram stain | - |
| Shape | Pleomorphic rod |
| Arrangement | Singles |
| Motile | No |
| Habitat | Host-associated |
| Oxygen requirement | Anaerobic |
| Salinity | |
| Temperature range | Mesophilic |
| Pathogenic | |
| Disease |
Genomic distribution of signal transduction proteins by replicon
Major modes
| Two-component | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Accession | Replicon | Size (Mbp) | One-component | HK | HHK | RR | HRR | Other | Chemotaxis * | ECF | Other | Total |
| NC_013410 | complete genome | 3.84 | 84 | 5 | 8 | 11 | 1 | 1 | 110 | |||
* Note: Chemotaxis is a specialized form of two-component systems (details)
Chemotaxis
| Accession | Replicon | Size (Mbp) | MCP | CheW | CheA | CheR | CheB | CheCX | CheV | CheD | CheZ | Other | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_013410 | complete genome | 3.84 |
Neighboring two-component genes
| Amount | Colocated with non 2CG | |
|---|---|---|
| Classical | 3 | 3 |
| Hybrid | 1 | |
| Complex | 2 | 1 |
| Orphan | 12 | 8 |
| Total | 18 | 12 |
