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- Haliangium ochraceum DSM 14365
Genome summary
| Organism | Haliangium ochraceum DSM 14365 |
|---|---|
| Taxonomy | Bacteria, Proteobacteria, Deltaproteobacteria, Myxococcales, Nannocystineae, Haliangiaceae, Haliangium |
| Size | 9.4 Mbp (9,446,314 bp) |
| Status | Complete |
| Replicons | 1 |
| Genes | 6,952 |
| Proteins | 6,719 |
| GC content | 69.5% |
| Gram stain | - |
| Shape | Rod |
| Arrangement | |
| Motile | Yes |
| Habitat | Aquatic |
| Oxygen requirement | Aerobic |
| Salinity | Moderate halophilic |
| Temperature range | Mesophilic |
| Pathogenic | |
| Disease |
Genomic distribution of signal transduction proteins by replicon
Major modes
| Two-component | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Accession | Replicon | Size (Mbp) | One-component | HK | HHK | RR | HRR | Other | Chemotaxis * | ECF | Other | Total |
| NC_013440 | complete genome | 9.45 | 446 | 52 | 29 | 74 | 16 | 1 | 24 | 2 | 7 | 651 |
* Note: Chemotaxis is a specialized form of two-component systems (details)
Chemotaxis
| Accession | Replicon | Size (Mbp) | MCP | CheW | CheA | CheR | CheB | CheCX | CheV | CheD | CheZ | Other | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_013440 | complete genome | 9.45 | 3 | 3 | 2 | 6 | 10 | 24 |
Neighboring two-component genes
| Amount | Colocated with non 2CG | |
|---|---|---|
| Classical | 18 | 12 |
| Hybrid | 2 | 2 |
| Complex | 9 | 7 |
| Orphan | 110 | 72 |
| Total | 139 | 93 |
