MiST2: Escherichia coli O111:H- str. 11128

Ulrich, L.E. and Zhulin, I.B. Nucleic Acids Res. (2009)

Cart (0 proteins)
Home
Escherichia coli O111:H- str. 11128

Warning: Javascript is disabled. Some parts of this website will not function properly and may not behave as expected. It is recommended that you enable Javascript to fully utilize all the features of MiST2.

Genome summary

Organism	Escherichia coli O111:H- str. 11128
Taxonomy	Bacteria, Proteobacteria, Gammaproteobacteria, Enterobacteriales, Enterobacteriaceae, Escherichia
Size	5.8 Mbp (5,766,081 bp)
Status	Complete
Replicons	6
Genes	5,935
Proteins	5,407
GC content	50.4%
Gram stain	-
Shape	Rod
Arrangement
Motile
Habitat
Oxygen requirement	Facultative
Salinity
Temperature range	Mesophilic
Pathogenic	Yes: Human
Disease

Signal Transduction Profile^*

^* Note: Chart based on domain counts (details)

Genomic distribution of signal transduction proteins by replicon

Major modes

				Two-component
Accession	Replicon	Size (Mbp)	One-component	HK	HHK	RR	HRR	Other	Chemotaxis ^*	ECF	Other	Total
	Total	5.77	265	23	6	28			10		7	339
NC_013364	complete genome	5.37	260	23	6	28			10		7	334
NC_013365	plasmid pO111_1	0.20	5									5
NC_013370	plasmid pO111_2	0.10
NC_013366	plasmid pO111_3	0.08
NC_013367	plasmid pO111_4	0.01
NC_013368	plasmid pO111_5	0.01

^* Note: Chemotaxis is a specialized form of two-component systems (details)

Chemotaxis

Accession	Replicon	Size (Mbp)	MCP	CheW	CheA	CheR	CheB	CheZ	Total
	Total	5.77	5	1	1	1	1	1	10
NC_013364	complete genome	5.37	5	1	1	1	1	1	10
NC_013365	plasmid pO111_1	0.20
NC_013370	plasmid pO111_2	0.10
NC_013366	plasmid pO111_3	0.08
NC_013367	plasmid pO111_4	0.01
NC_013368	plasmid pO111_5	0.01

Neighboring two-component genes

	Amount	Colocated with non 2CG
Classical	20	9
Hybrid	1
Complex
Orphan	15	7
Total	36	16