MiST2: Acetobacter pasteurianus IFO 3283-01

Ulrich, L.E. and Zhulin, I.B. Nucleic Acids Res. (2009)

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Acetobacter pasteurianus IFO 3283-01

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Genome summary

Organism	Acetobacter pasteurianus IFO 3283-01
Taxonomy	Bacteria, Proteobacteria, Alphaproteobacteria, Rhodospirillales, Acetobacteraceae, Acetobacter
Size	3.3 Mbp (3,340,249 bp)
Status	Complete
Replicons	7
Genes	3,122
Proteins	3,050
GC content	53.1%
Gram stain	-
Shape	Rod
Arrangement
Motile
Habitat	Multiple
Oxygen requirement	Aerobic
Salinity
Temperature range	Mesophilic
Pathogenic
Disease

Signal Transduction Profile^*

^* Note: Chart based on domain counts (details)

Genomic distribution of signal transduction proteins by replicon

Major modes

				Two-component
Accession	Replicon	Size (Mbp)	One-component	HK	HHK	RR	HRR	Other	Chemotaxis ^*	ECF	Other	Total
	Total	3.34	97	12	3	17	2				2	133
NC_013209	complete genome	2.91	81	9	3	13	2				2	110
NC_013210	plasmid pAPA01-011	0.19	7	1		1						9
NC_013211	plasmid pAPA01-020	0.18	5	2		3						10
NC_013212	plasmid pAPA01-030	0.05	4									4
NC_013213	plasmid pAPA01-040	0.00
NC_013214	plasmid pAPA01-050	0.00
NC_013215	plasmid pAPA01-060	0.00

^* Note: Chemotaxis is a specialized form of two-component systems (details)

Chemotaxis

Accession	Replicon	Size (Mbp)
	Total	3.34
NC_013209	complete genome	2.91
NC_013210	plasmid pAPA01-011	0.19
NC_013211	plasmid pAPA01-020	0.18
NC_013212	plasmid pAPA01-030	0.05
NC_013213	plasmid pAPA01-040	0.00
NC_013214	plasmid pAPA01-050	0.00
NC_013215	plasmid pAPA01-060	0.00

Neighboring two-component genes

	Amount	Colocated with non 2CG
Classical	8	7
Hybrid	2
Complex	2	2
Orphan	8	6
Total	20	15