Cart (0 proteins)- Home
- Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Genome summary
| Organism | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|---|
| Taxonomy | Bacteria, Firmicutes, Bacillales, Alicyclobacillaceae, Alicyclobacillus |
| Size | 3.2 Mbp (3,205,686 bp) |
| Status | Complete |
| Replicons | 4 |
| Genes | 3,235 |
| Proteins | 3,084 |
| GC content | 61.9% |
| Gram stain | + |
| Shape | Rod |
| Arrangement | |
| Motile | No |
| Habitat | Specialized |
| Oxygen requirement | Aerobic |
| Salinity | |
| Temperature range | Thermophilic |
| Pathogenic | |
| Disease |
Genomic distribution of signal transduction proteins by replicon
Major modes
| Two-component | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Accession | Replicon | Size (Mbp) | One-component | HK | HHK | RR | HRR | Other | Chemotaxis * | ECF | Other | Total |
| Total | 3.21 | 150 | 20 | 18 | 11 | 2 | 1 | 202 | ||||
| NC_013205 | complete genome | 3.02 | 141 | 19 | 17 | 11 | 1 | 1 | 190 | |||
| NC_013206 | plasmid pAACI01 | 0.09 | 3 | 3 | ||||||||
| NC_013207 | plasmid pAACI02 | 0.09 | 6 | 1 | 1 | 1 | 9 | |||||
| NC_013208 | plasmid pAACI03 | 0.01 | ||||||||||
* Note: Chemotaxis is a specialized form of two-component systems (details)
Chemotaxis
| Accession | Replicon | Size (Mbp) | MCP | CheW | CheA | CheR | CheB | CheCX | CheV | CheD | CheZ | Other | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | 3.21 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 11 | |||
| NC_013205 | complete genome | 3.02 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 11 | ||
| NC_013206 | plasmid pAACI01 | 0.09 | |||||||||||
| NC_013207 | plasmid pAACI02 | 0.09 | |||||||||||
| NC_013208 | plasmid pAACI03 | 0.01 |
Neighboring two-component genes
| Amount | Colocated with non 2CG | |
|---|---|---|
| Classical | 12 | 9 |
| Hybrid | ||
| Complex | 1 | 1 |
| Orphan | 11 | 9 |
| Total | 24 | 19 |
