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- Fusobacterium periodonticum ATCC 33693 (draft v1)
Genome summary
| Organism | Fusobacterium periodonticum ATCC 33693 |
|---|---|
| Taxonomy | Bacteria, Fusobacteria, Fusobacteriales, Fusobacteriaceae, Fusobacterium |
| Size | 2.6 Mbp (2,567,761 bp) |
| Status | Incomplete, draft version 1 |
| Contigs | 143 |
| Genes | 2,595 |
| Proteins | 2,544 |
| GC content | 27.4% |
| Gram stain | - |
| Shape | Rod |
| Arrangement | |
| Motile | No |
| Habitat | Host-associated |
| Oxygen requirement | Anaerobic |
| Salinity | |
| Temperature range | Mesophilic |
| Pathogenic | Yes: Human |
| Disease | Periodontitis |
Genomic distribution of signal transduction proteins by contig
Major modes
| Two-component | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Accession | Contig | Size (Mbp) | One-component | HK | HHK | RR | HRR | Other | Chemotaxis * | ECF | Other | Total |
| Total | 2.57 | 42 | 6 | 5 | 1 | 54 | ||||||
| NZ_ACJY01000099 | NZ_ACJY01000099 WGS | 0.15 | 5 | 5 | ||||||||
| NZ_ACJY01000051 | NZ_ACJY01000051 WGS | 0.12 | 1 | 1 | ||||||||
| NZ_ACJY01000086 | NZ_ACJY01000086 WGS | 0.11 | 1 | 1 | ||||||||
| NZ_ACJY01000101 | NZ_ACJY01000101 WGS | 0.10 | ||||||||||
| NZ_ACJY01000037 | NZ_ACJY01000037 WGS | 0.09 | 4 | 4 | ||||||||
| NZ_ACJY01000106 | NZ_ACJY01000106 WGS | 0.09 | 3 | 3 | ||||||||
| NZ_ACJY01000027 | NZ_ACJY01000027 WGS | 0.08 | 3 | 3 | ||||||||
| NZ_ACJY01000018 | NZ_ACJY01000018 WGS | 0.08 | 1 | 1 | ||||||||
| NZ_ACJY01000025 | NZ_ACJY01000025 WGS | 0.07 | 3 | 3 | ||||||||
| NZ_ACJY01000089 | NZ_ACJY01000089 WGS | 0.06 | 1 | 1 | ||||||||
| Browse major mode distribution for all 143 contigs | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | |
* Note: Chemotaxis is a specialized form of two-component systems (details)
Chemotaxis
| Accession | Contig | Size (Mbp) | MCP | CheW | CheA | CheR | CheB | CheCX | CheV | CheD | CheZ | Other | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | 2.57 | ||||||||||||
| NZ_ACJY01000099 | NZ_ACJY01000099 WGS | 0.15 | |||||||||||
| NZ_ACJY01000051 | NZ_ACJY01000051 WGS | 0.12 | |||||||||||
| NZ_ACJY01000086 | NZ_ACJY01000086 WGS | 0.11 | |||||||||||
| NZ_ACJY01000101 | NZ_ACJY01000101 WGS | 0.10 | |||||||||||
| NZ_ACJY01000037 | NZ_ACJY01000037 WGS | 0.09 | |||||||||||
| NZ_ACJY01000106 | NZ_ACJY01000106 WGS | 0.09 | |||||||||||
| NZ_ACJY01000027 | NZ_ACJY01000027 WGS | 0.08 | |||||||||||
| NZ_ACJY01000018 | NZ_ACJY01000018 WGS | 0.08 | |||||||||||
| NZ_ACJY01000025 | NZ_ACJY01000025 WGS | 0.07 | |||||||||||
| NZ_ACJY01000089 | NZ_ACJY01000089 WGS | 0.06 | |||||||||||
| Browse chemotaxis distribution for all 143 contigs | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | ||
Neighboring two-component genes
| Amount | Colocated with non 2CG | |
|---|---|---|
| Classical | 4 | 1 |
| Hybrid | ||
| Complex | ||
| Orphan | 3 | 3 |
| Total | 7 | 4 |
